Read the updated timeline if you can.
Ideas I would like to see:
*Same starter Pokémon: Treecko (definitely NOT a Yoshi!!!), Torchic (Year of the Torchic. I mean Chinese Zodiac.), Mudkip (u liek mudkipz?)
*Shadow Pokémon added alongside Pokérus. Shadow Pokémon are "evil" counterpart to Pokérus. And, Shadow Pokémon cannot breed because they are under purifying process.
*New (expanded) Hoenn Dex to allow more Pokémon to be listed.
*New player characters to replace Brendan and May.
*Team Snagem and Cipher visits Hoenn, Brendan become Cipher leader, and May become New Hoenn Champion.
*Team Snagem was taken over by International Police, and become special investigation unit.
*Cipher confront Team Magma and Team Aqua by making corrupted legendary again (but this time's not Shadow Lugia. A variant of Regigigas anyone?)
*Cipher captured Pacifidlog Town prior to main storyline.
*Wally becomes one of the Gym Leaders in Hoenn.
*Lunick (a Top Ranger with Minun) comes to Hoenn, distinguish himself as a Pulseman as he will enter Team Snagem, and as a Gym Leader (a referrence to to Giovanni as a former Gym Leader and a Team Rocket Leader, or Ronald as a player's rival and a Team Great Rocket member under alias "GR-X" in Here Comes Team-GR!). Then, he will battle the player characters several times as a Lunick himself, including Double Battles with Solana, or some Tag Battles if Lunick joins player and battles against any villainous team (Cipher, Magma or Aqua), or Triple battles against Cipher, Magma or Aqua. Lunick could also play a role similar to Looker in DPPt/BW/B2W2.
*Players should bring Regice, Registeel, Regirock to summon Regigigas from Cipher Laboratory in Pacifidlog Town.
*No CamelCase names (too long for the Sapphire ones). Follow the nomenculature of B2W2 (Ruby 2 and Sapphire 2 anyone?).
*Should be made for 3DS if possible.