Title says it all. Pokemon Special has good thing and not-so-good things about it but sometimes the writer likes to surprise and confuse us. Like how the Manga's story expands on the Pokemon games' aspects or how the Elite Four of Kanto is evil or how Green's (Blue) Ditto can form into inanimate objects such as keys. What stood out the most to you? And what confused you the most?
Feel free to reply so long as you keep on topic.